API¶

Class Hierarchy¶

- Namespace median
  - Template Struct cube_t
- Namespace utility
  - Namespace utility::umap_fits_file
    - Struct Cube
    - Struct Tile_Dim
    - Struct Tile_File
    - Class CfitsStoreFile
    - Class Tile
  - Struct umt_optstruct_t
- Struct options_t
- Struct rmat_option_t
- Struct vector_t
- Class beta_distribution
- Class pageiotest
- Class rmat_edge_generator
  - Class rmat_edge_generator::input_iterator_type
- Template Class vector_iterator

File Hierarchy¶

- Directory bfs
  - Directory generator
    - File generate_edge_list.cpp
    - File hash.hpp
    - File rmat_edge_generator.hpp
  - File bfs_kernel.hpp
  - File compute_degree_distribution.cpp
  - File ingest_edge_list.cpp
  - File README.md
  - File run_bfs.cpp
  - File test_bfs.cpp
- Directory churn
  - File churn.cpp
  - File options.cpp
  - File options.h
- Directory calculation
  - File INSTRUCTION.md
  - File run_random_vector.cpp
  - File test_median_calculation.cpp
  - File torben.hpp
  - File utility.hpp
  - File vector.hpp
- Directory pfbenchmark
  - File nvmebenchmark.cpp
  - File pfbenchmark.cpp
- Directory umapcpu
  - File umapcpu.cpp
- Directory umapsort
  - File umapsort.cpp
- Directory utility
  - File bitmap.hpp
  - File commandline.hpp
  - File file.hpp
  - File mmap.hpp
  - File time.hpp
  - File umap_file.hpp
  - File umap_fits_file.hpp

Full API¶

Classes and Structs¶

Template Struct cube_t
- Struct Documentation

Struct options_t
- Struct Documentation

Struct rmat_option_t
- Struct Documentation

Struct Cube
- Struct Documentation

Struct Tile_Dim
- Struct Documentation

Struct Tile_File
- Struct Documentation

Struct umt_optstruct_t
- Struct Documentation

Struct vector_t
- Struct Documentation

Class beta_distribution
- Class Documentation

Class pageiotest
- Class Documentation

Class rmat_edge_generator
- Nested Relationships
  - Nested Types
- Class Documentation

Class rmat_edge_generator::input_iterator_type

Class CfitsStoreFile
- Inheritance Relationships
  - Base Type
- Class Documentation

Class Tile
- Class Documentation

Template Class vector_iterator
- Class Documentation

Functions¶

Function bfs::init_bfs
- Function Documentation

Function bfs::run_bfs
- Function Documentation

Function check_edge_list
- Function Documentation

Function count_level
- Function Documentation

Function cpu_setcpu
- Function Documentation

Function do_read_modify_write_pages
- Function Documentation

Function do_read_pages(uint64_t)
- Function Documentation

Function do_read_pages(uint64_t, uint64_t)
- Function Documentation

Function do_write_pages(uint64_t)
- Function Documentation

Function do_write_pages(uint64_t, uint64_t)
- Function Documentation

Function find_bfs_root
- Function Documentation

Template Function get_index
- Function Documentation

Function getns(void)
- Function Documentation

Function getns(void)
- Function Documentation

Function getoptions(options_t&, int&, char **)
- Function Documentation

Function getoptions(options_t&, int&, char **)
- Function Documentation

Function ingest_edges
- Function Documentation

Function initdata(uint64_t *, int64_t)
- Function Documentation

Function initdata(uint64_t *, uint64_t)
- Function Documentation

Function main(int, char **)
- Function Documentation

Function main(int, char **)
- Function Documentation

Function main(int, char **)
- Function Documentation

Function main(int, char **)
- Function Documentation

Function main(int, char **)
- Function Documentation

Function main(int, char **)
- Function Documentation

Function main(int, char **)
- Function Documentation

Function main(int, char **)
- Function Documentation

Function main(int, char **)
- Function Documentation

Function main(int, char **)
- Function Documentation

Function main(int, char **)
- Function Documentation

Function main(int, char **)
- Function Documentation

Function map_graph(const size_t, const size_t, const std::string&)
- Function Documentation

Function map_graph(const size_t, const size_t, const std::string&)
- Function Documentation

Function map_in_file
- Function Documentation

Template Function median::get_cube_size
- Function Documentation

Template Function median::get_frame_size
- Function Documentation

Template Function median::get_index
- Function Documentation

Template Function median::is_nan
- Function Documentation

Template Function median::reverse_byte_order
- Function Documentation

Function parse_options(int, char **, std::string&, std::vector<std::string>&)
- Function Documentation

Function parse_options(int, char **, rmat_option_t *, std::string *)
- Function Documentation

Function parse_options(int, char **, size_t&, size_t&, std::string&)
- Function Documentation

Function parse_options(int, char **, size_t&, size_t&, std::string&, std::string&)
- Function Documentation

Function print_stats
- Function Documentation

Function print_top_median
- Function Documentation

Function read_modify_write_test
- Function Documentation

Function read_pages
- Function Documentation

Function read_test
- Function Documentation

Function rmat_edge_generator_detail::hash16
- Function Documentation

Function rmat_edge_generator_detail::hash32
- Function Documentation

Function rmat_edge_generator_detail::hash_nbits
- Function Documentation

Function rmat_edge_generator_detail::shifted_n_hash16
- Function Documentation

Function rmat_edge_generator_detail::shifted_n_hash32
- Function Documentation

Function shoot_vector
- Function Documentation

Template Function torben
- Function Documentation

Function unmap_file
- Function Documentation

Function usage
- Function Documentation

Function utility::bitmap_global_pos
- Function Documentation

Function utility::bitmap_local_pos
- Function Documentation

Function utility::bitmap_size
- Function Documentation

Function utility::create_file
- Function Documentation

Function utility::elapsed_time_sec()
- Function Documentation

Function utility::elapsed_time_sec(const std::chrono::high_resolution_clock::time_point&)
- Function Documentation

Function utility::extend_file_size(const int, const size_t)
- Function Documentation

Function utility::extend_file_size(const std::string&, const size_t)
- Function Documentation

Function utility::extend_file_size_manually
- Function Documentation

Function utility::get_bit
- Function Documentation

Function utility::get_page_size
- Function Documentation

Function utility::map_file
- Function Documentation

Function utility::map_file_read_mode
- Function Documentation

Function utility::map_file_write_mode
- Function Documentation

Function utility::map_in_file
- Function Documentation

Function utility::msync
- Function Documentation

Function utility::munmap
- Function Documentation

Function utility::set_bit
- Function Documentation

Function utility::umap_fits_file::operator<<
- Function Documentation

Function utility::umap_fits_file::PerFits_alloc_cube
- Function Documentation

Function utility::umap_fits_file::PerFits_free_cube
- Function Documentation

Function utility::umt_getoptions
- Function Documentation

Function utility::umt_getpagesize
- Function Documentation

Function utility::unmap_file
- Function Documentation

Function utility::usage
- Function Documentation

Function validate_level
- Function Documentation

Function validatedata
- Function Documentation

Function write_pages
- Function Documentation

Function write_test
- Function Documentation

Variables¶

Variable bfs::k_infinite_level
- Variable Documentation

Variable correct_median
- Variable Documentation

Variable default_num_random_vector
- Variable Documentation

Variable fd
- Variable Documentation

Variable FILENAME
- Variable Documentation

Variable g_count
- Variable Documentation

Variable glb_array
- Variable Documentation

Variable num_vectors
- Variable Documentation

Variable NUMCHURNPAGES
- Variable Documentation

Variable NUMCHURNTHREADS
- Variable Documentation

Variable NUMLOADPAGES
- Variable Documentation

Variable NUMLOADREADERS
- Variable Documentation

Variable NUMLOADWRITERS
- Variable Documentation

Variable options
- Variable Documentation

Variable options
- Variable Documentation

Variable page_step
- Variable Documentation

Variable pages_to_access
- Variable Documentation

Variable pages_to_access
- Variable Documentation

Variable pagesize
- Variable Documentation

Variable pagesize
- Variable Documentation

Variable shuffled_indexes
- Variable Documentation

Variable shuffled_indexes
- Variable Documentation

Variable sort_ascending
- Variable Documentation

Variable TESTDURATION
- Variable Documentation

Variable tmppagebuf
- Variable Documentation

Variable usemmap
- Variable Documentation

Variable utility::BUFFERSIZE
- Variable Documentation

Variable utility::DIRNAME
- Variable Documentation

Variable utility::FILENAME
- Variable Documentation

Variable utility::NUMPAGES
- Variable Documentation

Variable utility::NUMTHREADS
- Variable Documentation

Variable utility::umap_fits_file::Cubes
- Variable Documentation

Variable x_intercept
- Variable Documentation

Variable x_slope
- Variable Documentation

Variable y_intercept
- Variable Documentation

Variable y_slope
- Variable Documentation

Defines¶

Define _GNU_SOURCE
- Define Documentation

Define _GNU_SOURCE
- Define Documentation

Define _GNU_SOURCE
- Define Documentation

Define _GNU_SOURCE
- Define Documentation

Define _GNU_SOURCE
- Define Documentation

Define _GNU_SOURCE
- Define Documentation

Define _GNU_SOURCE
- Define Documentation

Define handle_error_en
- Define Documentation

Define MEDIAN_CALCULATION_COLUMN_MAJOR
- Define Documentation

Typedefs¶

Typedef pixel_type
- Typedef Documentation

Typedef pixel_type
- Typedef Documentation

Directories¶

Directory bfs
- Subdirectories
- Files

Directory generator
- Files

Directory churn
- Files

Directory calculation
- Files

Directory pfbenchmark
- Files

Directory umapcpu
- Files

Directory umapsort
- Files

Directory utility
- Files

Files¶

File bfs_kernel.hpp

File bitmap.hpp

File churn.cpp

File commandline.hpp

File compute_degree_distribution.cpp

File file.hpp

File generate_edge_list.cpp

File hash.hpp

File ingest_edge_list.cpp

File INSTRUCTION.md
- Definition (median_calculation/INSTRUCTION.md)
  - Program Listing for File INSTRUCTION.md

File mmap.hpp

File nvmebenchmark.cpp

File options.cpp

File options.h

File pfbenchmark.cpp

File README.md
- Definition (bfs/README.md)
  - Program Listing for File README.md

File rmat_edge_generator.hpp

File run_bfs.cpp

File run_random_vector.cpp

File test_bfs.cpp

File test_median_calculation.cpp

File time.hpp

File torben.hpp

File umap_file.hpp

File umap_fits_file.hpp

File umapcpu.cpp

File umapsort.cpp

File utility.hpp

File vector.hpp

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